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Cnidaria of the CA-Newfoundland-shelf

There are 67 species of Cnidaria that are commonly found in the CA-Newfoundland-shelf.

Information on the COI barcoding status of these species is presented in the table below.
MODE
A		 All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):
  • Of the 67 total species, 40 of these species (59%) have COI barcodes (from this or any ocean).
  • There are a total of 1332 "any ocean" COI barcode records available for this ocean and taxa group.
  • All available taxa group COI barcodes will be included in the Mode A downloads.
    • MODE
    B    		 Regional COI barcodes for this taxa group (includes only those collected in the CA-Newfoundland-shelf region):
  • Of the 67 total species, 14 of these species (20%) have CA-Newfoundland-shelf-collected COI barcodes.
  • There are a total of 55 "CA-Newfoundland-shelf-collected" COI barcodes available for this taxa group.
  • In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
    • Uncoded
    Species    		 Of the 67 total species in this region, 27 species do not have any COI barcodes (from any region).

     Barcoding progress summary for the CA-Newfoundland-shelf region, out of a total of 67 possible species:
    • There are COI barcodes for 40 species ( 59% coverage ), of which 14 species have barcodes sampled inside this region ( 20% coverage ).
      •
    • There are 12S barcodes for 16 species ( 23% coverage ), of which 1 species have barcodes sampled inside this region ( 1% coverage ). 
    • There are 16S barcodes for 36 species ( 53% coverage ), of which 1 species have barcodes sampled inside this region ( 1% coverage ).
    • There are 18S barcodes for 30 species ( 44% coverage ), of which 1 species have barcodes sampled inside this region ( 1% coverage ).
    • There are 28S barcodes for 25 species ( 37% coverage ), of which 1 species have barcodes sampled inside this region ( 1% coverage ).
    Change Region   [ ICES North Atlantic ] [ Baltic Sea ] [ Mediterranean Sea ]
          [ ICES western North Atlantic ] [ US-NE-LME ] [ CA-Scotian ] [ CA-GSL ] [ CA-Newfoundland-shelf ]
          [ ICES eastern North Atlantic ] [ Icelandic-Waters ] [ Faroe-Islands ] [ Norwegian-Sea ] [ Barents-Sea ] [ Celtic-Seas ] [ North-Sea ] [ Iberian-Shelf ]
    -----> Click here to go back to the Group Summary page. <-----


    Cnidaria of the CA-Newfoundland-shelf
    MZGdb DATA FILES

    Database-Version:   v2023-m04-01    		 --->   Mode-A   <---

    COI barcodes = 1332
    12S barcodes = 38
    16S barcodes = 219
    18S barcodes = 95
    28S barcodes = 108
    		 Mode-B

    COI barcodes = 55
    12S barcodes = 1
    16S barcodes = 1
    18S barcodes = 1
    28S barcodes = 1
    		 Mode-C

    COI records = 2350
    12S records = 56
    16S records = 599
    18S records = 271
    28S records = 351
    		 Mode-D

    COI records = 64
    12S records = 3
    16S records = 3
    18S records = 4
    28S records = 3
    FASTA file MZGdb fasta (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb fasta (mode-B)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb fasta (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb fasta (mode-D)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)
    Mothur-formatted
    Taxonomic Hierarchy file

    (paired with FASTA file above)    		 MZGdb Mothur (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb Mothur (mode-B)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb Mothur (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb Mothur (mode-D)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)
    MZGdb v3.0

    "full format"

    go to
    Format Description    		CSV

    Excel-friendly full format
    comma-separated-values    		 MZGdb CSV (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb CSV (mode-B)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb CSV (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb CSV (mode-D)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)
    PSV

    pipe-separated-values    		 MZGdb PSV (mode-A)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from ANY ocean     (mode-A)     		MZGdb PSV (mode-B)
    COI | 12S | 16S | 18S | 28S

    True "barcode" (species-only) data
    from specific ocean     (mode-B)     		MZGdb PSV (mode-C)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from ANY ocean     (mode-C)     		MZGdb PSV (mode-D)
    COI | 12S | 16S | 18S | 28S

    Genus-spp and species data
    from specific ocean     (mode-D)


    MZGdb Atlas [ database-version = v2023-m04-01 ];   html-date = 2023-Apr-12









    Wed Apr 12 17:30:49 EDT 2023