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Squaliformes of the US-NE-LME

There are 8 species of Squaliformes that are commonly found in the US-NE-LME.

Information on the COI barcoding status of these species is presented in the table below.
MODE
A		 All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):
  • Of the 8 total species, 7 of these species (87%) have COI barcodes (from this or any ocean).
  • There are a total of 230 "any ocean" COI barcode records available for this ocean and taxa group.
  • All available taxa group COI barcodes will be included in the Mode A downloads.
    • MODE
    B    		 Regional COI barcodes for this taxa group (includes only those collected in the US-NE-LME region):
  • Of the 8 total species, 2 of these species (25%) have US-NE-LME-collected COI barcodes.
  • There are a total of 13 "US-NE-LME-collected" COI barcodes available for this taxa group.
  • In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
    • Uncoded
    Species    		 Of the 8 total species in this region, 1 species do not have any COI barcodes (from any region).

     Barcoding progress summary for the US-NE-LME region, out of a total of 8 possible species:
    • There are COI barcodes for 7 species ( 87% coverage ), of which 2 species have barcodes sampled inside this region ( 25% coverage ).
      •
    • There are 12S barcodes for 6 species ( 75% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ). 
    • There are 16S barcodes for 7 species ( 87% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 18S barcodes for 2 species ( 25% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
    • There are 28S barcodes for 3 species ( 37% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).
    MZGdb Data Download Options
    ---> CLICK HERE <---


    Change Region   [ ICES North Atlantic ] [ Baltic Sea ] [ Mediterranean Sea ]
          [ ICES western North Atlantic ] [ US-NE-LME ] [ CA-Scotian ] [ CA-GSL ] [ CA-Newfoundland-shelf ]
          [ ICES eastern North Atlantic ] [ Icelandic-Waters ] [ Faroe-Islands ] [ Norwegian-Sea ] [ Barents-Sea ] [ Celtic-Seas ] [ North-Sea ] [ Iberian-Shelf ]
    Table Viewing Options   [ Species-only Summary, sorted by name (default) ]   or   [ Full Taxonomic Hierarchy ]   or   [ flat-text file of sorted species names ]


    Squaliformes of the US-NE-LME
    Taxa Name

    		Taxa
    Level    		Barcode
    Data?    		Number of
    Barcodes
    from
    any ocean    		Number of
    Barcodes
    from this region    		Barcode Locations and
    Species Occurence Map    		MZGdb Atlas
    v2023-m04-01

    2023-Apr-07
    Squaliformes Order cummulative
    sub-totals
    ------->
    for this
    Order    		 Total Species:   8
    Sp. w/COI-Barcodes:  7

    Total COI-Barcodes:   230    		 Total Species:   8
    Sp. w/COI-Barcodes:  2

    Total COI-Barcodes:   13    		 accepted
    T5012892

    R:1:1:0:0
    ⋄   Centrophoridae Family cummulative
    sub-totals
    ------->
    for this
    Family    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   32    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   1    		 accepted
    T5012893

    R:1:0:0:0
    ⋄   ⋄   Centrophorus Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   32    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   1    		 accepted
    T5012894

    R:1:0:0:0
    ⋄   ⋄   ⋄   Centrophorus granulosus Species
    (1)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 32
      12S = 4
      16S = 8
      18S = 0
      28S = 2
    		   COI = 1
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5013007

    R:1:0:0:0
    ⋄   Etmopteridae Family cummulative
    sub-totals
    ------->
    for this
    Family    		 Total Species:   4
    Sp. w/COI-Barcodes:  3

    Total COI-Barcodes:   26    		 Total Species:   4
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0    		 accepted
    T5013328

    R:1:1:0:0
    ⋄   ⋄   Centroscyllium Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   15    		 Total Species:   1
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0    		 accepted
    T5013450

    R:1:0:0:0
    ⋄   ⋄   ⋄   Centroscyllium fabricii Species
    (2)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 15
      12S = 2
      16S = 1
      18S = 1
      28S = 1
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5013621

    R:1:0:0:0
    ⋄   ⋄   Etmopterus Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   3
    Sp. w/COI-Barcodes:  2

    Total COI-Barcodes:   11    		 Total Species:   3
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0    		 accepted
    T5013391

    R:1:1:0:0
    ⋄   ⋄   ⋄   Etmopterus gracilispinis Species
    (3)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 3
      12S = 2
      16S = 2
      18S = 0
      28S = 0
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5013693

    R:1:0:0:0
    ⋄   ⋄   ⋄   Etmopterus hillianus Species
    (4)    		 No barcodes?   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 no map accepted
    T5019644

    R:1:0:0:0
    ⋄   ⋄   ⋄   Etmopterus princeps Species
    (5)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 8
      12S = 3
      16S = 3
      18S = 0
      28S = 0
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5013698

    R:1:0:0:0
    ⋄   Somniosidae Family cummulative
    sub-totals
    ------->
    for this
    Family    		 Total Species:   2
    Sp. w/COI-Barcodes:  2

    Total COI-Barcodes:   20    		 Total Species:   2
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0    		 accepted
    T5013330

    R:1:1:0:0
    ⋄   ⋄   Centroscymnus Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   10    		 Total Species:   1
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0    		 accepted
    T5013451

    R:1:0:0:0
    ⋄   ⋄   ⋄   Centroscymnus coelolepis Species
    (6)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 10
      12S = 0
      16S = 1
      18S = 0
      28S = 0
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5013625

    R:1:0:0:0
    ⋄   ⋄   Somniosus Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   10    		 Total Species:   1
    Sp. w/COI-Barcodes:  0

    Total COI-Barcodes:   0    		 accepted
    T5013538

    R:1:1:0:0
    ⋄   ⋄   ⋄   Somniosus microcephalus Species
    (7)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 10
      12S = 6
      16S = 4
      18S = 0
      28S = 0
    		   COI = 0
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5013896

    R:1:1:0:0
    ⋄   Squalidae Family cummulative
    sub-totals
    ------->
    for this
    Family    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   152    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   12    		 accepted
    T5013309

    R:1:1:0:0
    ⋄   ⋄   Squalus Genus cummulative
    sub-totals
    ------->
    for this
    Genus    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   152    		 Total Species:   1
    Sp. w/COI-Barcodes:  1

    Total COI-Barcodes:   12    		 accepted
    T5013430

    R:1:1:0:0
    ⋄   ⋄   ⋄   Squalus acanthias Species
    (8)    		 COI
    12S
    16S
    18S
    28S
    		   COI = 152
      12S = 6
      16S = 18
      18S = 1
      28S = 2
    		   COI = 12
      12S = 0
      16S = 0
      18S = 0
      28S = 0
    		 accepted
    T5013905

    R:1:1:0:0
    MZGdb Atlas [ database-version = v2023-m04-01 ];   html-date = 2023-Apr-07









    Fri Apr 7 12:50:35 EDT 2023