MZGdb Atlas Bacteria (US-NE-LME)

W
G
I
M
T
/
M
E
T
A
Z
O
O
G
E
N
E

Bacteria of the US-NE-LME There are 30 species of Bacteria that are commonly found in the US-NE-LME. Information on the COI barcoding* status of these species is presented in the table below.*
MODE A	*All available COI barcodes for this taxa group (collected from any ocean and/or without geo-referencing):* Of the 30 total species, 2 of these species (6%) have COI barcodes (from this or any ocean). There are a total of 3 "any ocean" COI barcode records available for this ocean and taxa group. All available taxa group COI barcodes will be included in the Mode A downloads.
MODE B	*Regional COI barcodes for this taxa group (includes only those collected in the* US-NE-LME region):** Of the 30 total species, 0 of these species (0%) have US-NE-LME-collected COI barcodes. There are a total of 0 "US-NE-LME-collected" COI barcodes available for this taxa group. In the map to the right, Red Stars show sampling locations of the COI barcodes in the Mode B download.
Uncoded Species	Of the 30 total species in this region, 28 species do not have any COI barcodes (from any region).

Barcoding progress summary for the US-NE-LME region, out of a total of 30 possible species:

There are COI barcodes for 2 species ( 6% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).

There are 12S barcodes for 0 species ( 0% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).

There are 16S barcodes for 18 species ( 60% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).

There are 18S barcodes for 0 species ( 0% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).

There are 28S barcodes for 0 species ( 0% coverage ), of which 0 species have barcodes sampled inside this region ( 0% coverage ).

[ back to Previous page | back to US-NE-LME main page ]

click on map above to see a larger version

MZGdb Data Download Options
---> CLICK HERE <---

Change Region [ ICES North Atlantic ] [ Baltic Sea ] [ Mediterranean Sea ]
[ ICES western North Atlantic ] [ US-NE-LME ] [ CA-Scotian ] [ CA-GSL ] [ CA-Newfoundland-shelf ]
[ ICES eastern North Atlantic ] [ Icelandic-Waters ] [ Faroe-Islands ] [ Norwegian-Sea ] [ Barents-Sea ] [ Celtic-Seas ] [ North-Sea ] [ Iberian-Shelf ]

Table Viewing Options [ Species-only Summary, sorted by name (default) ] or [ Full Taxonomic Hierarchy ] or [ flat-text file of sorted species names ]

Quality Control: I have removed 2 WoRMS-identified "non-marine" species,
which are not included in the Total Species count above. [ Show me a list of removed brackish species ]

Bacteria of the US-NE-LME

Taxa Name	Taxa Level	Barcode Data?	Number of Barcodes from *any* ocean	Number of Barcodes from *this region*	Barcode Locations and Species Occurence Map	MZGdb Atlas v2025-m03-01 2025-May-05
Anabaena torulosa	Species (1)	COI 12S 16S 18S 28S	COI = 0 12S = 0 16S = 6 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2012584 R:1:0:1:1
Blennothrix glutinosa	Species (2)	COI 12S 16S 18S 28S	COI = 0 12S = 0 16S = 10 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2007693 R:1:0:0:0
Blennothrix lyngbyacea	Species (3)	No barcodes?	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2007694 R:1:0:0:0
Brachytrichia quoyi	Species (4)	No barcodes?	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2012937 R:1:0:0:1
Calothrix aeruginea	Species (5)	No barcodes?	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2007807 R:1:0:0:0
Calothrix confervicola	Species (6)	No barcodes?	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2003030 R:1:0:0:0
Calothrix parasitica	Species (7)	COI 12S 16S 18S 28S	COI = 0 12S = 0 16S = 1 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2007812 R:1:0:0:0
Calothrix pulvinata	Species (8)	No barcodes?	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2002222 R:1:0:0:0
Calothrix scopulorum	Species (9)	COI 12S 16S 18S 28S	COI = 0 12S = 0 16S = 2 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2007815 R:1:0:0:1
Coleofasciculus chthonoplastes	Species (10)	COI 12S 16S 18S 28S	COI = 0 12S = 0 16S = 140 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2008150 R:1:0:0:0
Dermocarpella prasina	Species (11)	No barcodes?	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2013721 R:1:0:0:0
Hyella caespitosa	Species (12)	No barcodes?	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2014737 R:1:0:0:0
Isactis plana	Species (13)	No barcodes?	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2009510 R:1:0:0:0
Lyngbya aestuarii	Species (14)	COI 12S 16S 18S 28S	COI = 0 12S = 0 16S = 24 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2002167 R:1:1:1:1
Lyngbya confervoides	Species (15)	COI 12S 16S 18S 28S	COI = 0 12S = 0 16S = 6 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2002433 R:1:1:1:0
Lyngbya majuscula	Species (16)	COI 12S 16S 18S 28S	COI = 0 12S = 0 16S = 17 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2017325 R:1:1:1:0
Lyngbya semiplena	Species (17)	COI 12S 16S 18S 28S	COI = 0 12S = 0 16S = 2 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2003032 R:1:0:1:0
Mastigocoleus testarum	Species (18)	COI 12S 16S 18S 28S	COI = 0 12S = 0 16S = 4 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2015164 R:1:0:1:1
Microcystis aeruginosa	Species (19)	COI 12S 16S 18S 28S	COI = 2 12S = 0 16S = 577 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2017272 R:1:0:1:0
Nodularia harveyana	Species (20)	COI 12S 16S 18S 28S	COI = 0 12S = 0 16S = 30 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2002245 R:1:0:1:0
Nodularia spumigena	Species (21)	COI 12S 16S 18S 28S	COI = 1 12S = 0 16S = 82 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2002268 R:1:0:1:0
Phormidium nigroviride	Species (22)	No barcodes?	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2001996 R:1:0:0:1
Pleurocapsa fuliginosa	Species (23)	COI 12S 16S 18S 28S	COI = 0 12S = 0 16S = 2 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2015724 R:1:0:0:1
Pseudanabaena persicina	Species (24)	COI 12S 16S 18S 28S	COI = 0 12S = 0 16S = 8 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2015817 R:1:0:1:0
Rivularia atra	Species (25)	COI 12S 16S 18S 28S	COI = 0 12S = 0 16S = 3 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2016180 R:1:0:0:0
Rivularia nitida	Species (26)	No barcodes?	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2002272 R:1:0:0:0
Scytonematopsis crustacea	Species (27)	COI 12S 16S 18S 28S	COI = 0 12S = 0 16S = 2 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2004285 R:1:0:0:0
Spirulina subsalsa	Species (28)	COI 12S 16S 18S 28S	COI = 0 12S = 0 16S = 42 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2003055 R:1:1:1:1
Tapinothrix violacea	Species (29)	No barcodes?	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2016599 R:1:0:0:0
Trichocoleus tenerrimus	Species (30)	No barcodes?	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	COI = 0 12S = 0 16S = 0 18S = 0 28S = 0	*no map*	accepted T2016693 R:1:0:0:0

MZGdb Atlas [ database-version = v2025-m03-01 ]; html-date = 2025-May-05

Mon May 5 10:34:44 PM EDT 2025